from fidanka.fiducial.fiducial import hull_density import pandas as pd import matplotlib.pyplot as plt import os import numpy as np from tqdm.notebook import tqdm from scipy import signal from scipy.spatial.distance import pdist, squareform from scipy.cluster.hierarchy import linkage, dendrogram, fcluster from scipy.ndimage import minimum_filter, maximum_filter, sobel from skimage.util import invert from itertools import combinations from dtaidistance import dtw from astroML.correlation import two_point from scipy.stats import gaussian_kde import pickle as pkl from mplEasyAnimate import animation from skimage.filters import threshold_otsu from skimage import data, io, filters from skimage.feature import hessian_matrix, hessian_matrix_eigvals from sklearn.cluster import DBSCAN from sklearn.cluster import HDBSCAN from skimage.filters import frangi from scipy.spatial import ConvexHull, QhullError from scipy.ndimage import binary_erosion from shapely.geometry import Polygon, Point from scipy.interpolate import interp1d from scipy.ndimage import gaussian_filter1d from scipy.spatial import distance_matrix from scipy.sparse.csgraph import minimum_spanning_tree from scipy.sparse import csr_matrix plt.style.use(pubStyle)