LAPACK Testing Automation Script

The Python script automates the process of running LAPACK (Linear Algebra Package) tests, analyzing their output, and summarizing the results. It supports various options for specifying the directory of LAPACK testing files, selecting types of tests to run (e.g., linear equations, eigen problems), and focusing on specific precision types (e.g., single, double). Additionally, it allows users to opt for a shorter summary or only error reporting. The script also handles the execution of the LAPACK tests if requested, making it a comprehensive tool for LAPACK testing and validation.

#!/usr/bin/env python3
 
 
###############################################################################
# lapack_testing.py
###############################################################################
 
from subprocess import Popen, STDOUT, PIPE
import os, sys, math
import getopt
# Arguments
try:
    opts, args = getopt.getopt(sys.argv[1:], "hd:b:srep:t:n",
                               ["help", "dir=", "bin=", "short", "run", "error","prec=","test=","number"])
 
except getopt.error as msg:
    print(msg)
    print("for help use --help")
    sys.exit(2)
 
short_summary = False
with_file = True
just_errors = False
prec='x'
test='all'
only_numbers = False
test_dir='TESTING'
bin_dir='bin/Release'
 
for o, a in opts:
    if o in ("-h", "--help"):
        print(sys.argv[0]+" [-h|--help] [-d dir |--dir dir] [-s |--short] [-r |--run] [-e |--error] [-p p |--prec p] [-t test |--test test] [-n | --number]")
        print("     - h is to print this message")
        print("     - r is to use to run the LAPACK tests then analyse the output (.out files). By default, the script will not run all the LAPACK tests")
        print("     - d [dir] indicates the location of the LAPACK testing directory (.out files). By default, the script will use {:s}.".format(test_dir))
        print("     - b [bin] indicates the location of the LAPACK binary files. By default, the script will use {:s}.".format(bin_dir))
        print(" LEVEL OF OUTPUT")
        print("     - e is to print only the error summary")
        print("     - s is to print a short summary")
        print("     - n is to print the numbers of failing tests (turn on summary mode)")
        print(" SECLECTION OF TESTS:")
        print("     - p [s/c/d/z/x] is to indicate the PRECISION to run:")
        print("            s=single")
        print("            d=double")
        print("            sd=single/double")
        print("            c=complex")
        print("            z=double complex")
        print("            cz=complex/double complex")
        print("            x=all [DEFAULT]")
        print("     - t [lin/eig/mixed/rfp/all] is to indicate which TEST FAMILY to run:")
        print("            lin=Linear Equation")
        print("            eig=Eigen Problems")
        print("            mixed=mixed-precision")
        print("            rfp=rfp format")
        print("            all=all tests [DEFAULT]")
        print(" EXAMPLES:")
        print("     ./lapack_testing.py -n")
        print("            Will return the numbers of failed tests by analyzing the LAPACK output")
        print("     ./lapack_testing.py -n -r -p s")
        print("            Will return the numbers of failed tests in REAL precision by running the LAPACK Tests then analyzing the output")
        print("     ./lapack_testing.py -n -p s -t eig ")
        print("            Will return the numbers of failed tests in REAL precision by analyzing only the LAPACK output of EIGEN testings")
        sys.exit(0)
    else:
        if o in ("-s", "--short"):
            short_summary = True
        if o in ("-r", "--run"):
            with_file = False
        if o in ("-e", "--error"):
            just_errors = True
        if o in ( '-p', '--prec' ):
            prec = a
        if o in ( '-b', '--bin' ):
            bin_dir = a
        if o in ( '-d', '--dir' ):
            test_dir = a
        if o in ( '-t', '--test' ):
            test = a
        if o in ( '-n', '--number' ):
            only_numbers = True
            short_summary = True
 
# process options
 
abs_bin_dir=os.path.abspath(bin_dir)
 
os.chdir(test_dir)
 
execution=1
summary="\n\t\t\t-->   LAPACK TESTING SUMMARY  <--\n";
if with_file: summary+= "\t\tProcessing LAPACK Testing output found in the "+test_dir+" directory\n";
summary+="SUMMARY             \tnb test run \tnumerical error   \tother error  \n";
summary+="================   \t===========\t=================\t================  \n";
nb_of_test=0
 
# Add current directory to the path for subshells of this shell
# Allows the popen to find local files in both windows and unixes
os.environ["PATH"] = os.environ["PATH"]+":."
 
# Define a function to open the executable (different filenames on unix and Windows)
def run_summary_test( f, cmdline, short_summary):
    nb_test_run=0
    nb_test_fail=0
    nb_test_illegal=0
    nb_test_info=0
 
    if with_file:
        if not os.path.exists(cmdline):
            error_message=cmdline+" file not found"
            r=1
            if short_summary: return [nb_test_run,nb_test_fail,nb_test_illegal,nb_test_info]
        else:
            pipe = open(cmdline,'r')
            r=0
    else:
        cmdline = os.path.join(abs_bin_dir, cmdline)
 
        outfile=cmdline.split()[4]
        #pipe = open(outfile,'w')
        p = Popen(cmdline, shell=True)#, stdout=pipe)
        p.wait()
        #pipe.close()
        r=p.returncode
        pipe = open(outfile,'r')
        error_message=cmdline+" did not work"
 
    if r != 0 and not with_file:
        print("---- TESTING " + cmdline.split()[0] + "... FAILED(" + error_message +") !")
        for line in pipe.readlines():
            f.write(str(line))
    elif r != 0 and with_file and not short_summary:
        print("---- WARNING: please check that you have the LAPACK output : "+cmdline+"!")
        print("---- WARNING: with the option -r, we can run the LAPACK testing for you")
        # print "---- "+error_message
    else:
        for line in pipe.readlines():
            f.write(str(line))
            words_in_line=line.split()
            if (line.find("run")!=-1):
#                  print line
                whereisrun=words_in_line.index("run)")
                nb_test_run+=int(words_in_line[whereisrun-2])
            if (line.find("out of")!=-1):
                if not short_summary: print(line, end=' ')
                whereisout= words_in_line.index("out")
                nb_test_fail+=int(words_in_line[whereisout-1])
            if ((line.find("illegal")!=-1) or (line.find("Illegal")!=-1)):
                if not short_summary: print(line, end=' ')
                nb_test_illegal+=1
            if (line.find(" INFO")!=-1):
                if not short_summary: print(line, end=' ')
                nb_test_info+=1
            if with_file:
                pipe.close()
 
    f.flush();
 
    return [nb_test_run,nb_test_fail,nb_test_illegal,nb_test_info]
 
 
# If filename cannot be opened, send output to sys.stderr
filename = "testing_results.txt"
try:
    f = open(filename, 'w')
except IOError:
    f = sys.stdout
 
if not short_summary:
    print(" ")
    print("---------------- Testing LAPACK Routines ----------------")
    print(" ")
    print("-- Detailed results are stored in", filename)
 
dtypes = (
("s", "d", "c", "z"),
("REAL             ", "DOUBLE PRECISION", "COMPLEX          ", "COMPLEX16         "),
)
 
if prec=='s':
    range_prec=[0]
elif prec=='d':
    range_prec=[1]
elif prec=='sd':
    range_prec=[0,1]
elif prec=='c':
    range_prec=[2]
elif prec=='z':
    range_prec=[3]
elif prec=='cz':
    range_prec=[2,3]
else:
    prec='x';
    range_prec=list(range(4))
 
if test=='lin':
    range_test=[16]
elif test=='mixed':
    range_test=[17]
    range_prec=[1,3]
elif test=='rfp':
    range_test=[18]
elif test=='eig':
    range_test=list(range(16))
else:
    range_test=list(range(19))
 
list_results = [
[0, 0, 0, 0, 0],
[0, 0, 0, 0, 0],
[0, 0, 0, 0, 0],
[0, 0, 0, 0, 0],
]
 
for dtype in range_prec:
    letter = dtypes[0][dtype]
    name = dtypes[1][dtype]
 
    if not short_summary:
        print(" ")
        print("------------------------- %s ------------------------" % name)
        print(" ")
        sys.stdout.flush()
 
    dtests = (
    ("nep", "sep", "se2", "svd",
    letter+"ec",letter+"ed",letter+"gg",
    letter+"gd",letter+"sb",letter+"sg",
    letter+"bb","glm","gqr",
    "gsv","csd","lse",
    letter+"test", letter+dtypes[0][dtype-1]+"test",letter+"test_rfp"),
    ("Nonsymmetric-Eigenvalue-Problem", "Symmetric-Eigenvalue-Problem", "Symmetric-Eigenvalue-Problem-2-stage", "Singular-Value-Decomposition",
    "Eigen-Condition","Nonsymmetric-Eigenvalue","Nonsymmetric-Generalized-Eigenvalue-Problem",
    "Nonsymmetric-Generalized-Eigenvalue-Problem-driver", "Symmetric-Eigenvalue-Problem", "Symmetric-Eigenvalue-Generalized-Problem",
    "Banded-Singular-Value-Decomposition-routines", "Generalized-Linear-Regression-Model-routines", "Generalized-QR-and-RQ-factorization-routines",
    "Generalized-Singular-Value-Decomposition-routines", "CS-Decomposition-routines", "Constrained-Linear-Least-Squares-routines",
    "Linear-Equation-routines", "Mixed-Precision-linear-equation-routines","RFP-linear-equation-routines"),
    (letter+"nep", letter+"sep", letter+"se2", letter+"svd",
    letter+"ec",letter+"ed",letter+"gg",
    letter+"gd",letter+"sb",letter+"sg",
    letter+"bb",letter+"glm",letter+"gqr",
    letter+"gsv",letter+"csd",letter+"lse",
    letter+"test", letter+dtypes[0][dtype-1]+"test",letter+"test_rfp"),
    )
 
 
    for dtest in range_test:
        nb_of_test=0
        # NEED TO SKIP SOME PRECISION (namely s and c) FOR PROTO MIXED PRECISION TESTING
        if dtest==17 and (letter=="s" or letter=="c"):
            continue
        if with_file:
            cmdbase=dtests[2][dtest]+".out"
        else:
            if dtest==16:
                # LIN TESTS
                cmdbase="xlintst"+letter+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out"
            elif dtest==17:
                # PROTO LIN TESTS
                cmdbase="xlintst"+letter+dtypes[0][dtype-1]+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out"
            elif dtest==18:
                # PROTO LIN TESTS
                cmdbase="xlintstrf"+letter+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out"
            else:
                # EIG TESTS
                cmdbase="xeigtst"+letter+" < "+dtests[0][dtest]+".in > "+dtests[2][dtest]+".out"
        if not just_errors and not short_summary:
            print("Testing "+name+" "+dtests[1][dtest]+"-"+cmdbase, end=' ')
        # Run the process: either to read the file or run the LAPACK testing
        nb_test = run_summary_test(f, cmdbase, short_summary)
        list_results[0][dtype]+=nb_test[0]
        list_results[1][dtype]+=nb_test[1]
        list_results[2][dtype]+=nb_test[2]
        list_results[3][dtype]+=nb_test[3]
        got_error=nb_test[1]+nb_test[2]+nb_test[3]
 
        if not short_summary:
            if nb_test[0] > 0 and not just_errors:
                print("passed: "+str(nb_test[0]))
            if nb_test[1] > 0:
                print("failing to pass the threshold: "+str(nb_test[1]))
            if nb_test[2] > 0:
                print("Illegal Error: "+str(nb_test[2]))
            if nb_test[3] > 0:
                print("Info Error: "+str(nb_test[3]))
            if got_error > 0 and just_errors:
                print("ERROR IS LOCATED IN "+name+" "+dtests[1][dtest]+" [ "+cmdbase+" ]")
                print("")
            if not just_errors:
                print("")
#     elif (got_error>0):
#        print dtests[2][dtest]+".out \t"+str(nb_test[1])+"\t"+str(nb_test[2])+"\t"+str(nb_test[3])
 
        sys.stdout.flush()
    if (list_results[0][dtype] > 0 ):
        percent_num_error=float(list_results[1][dtype])/float(list_results[0][dtype])*100
        percent_error=float(list_results[2][dtype]+list_results[3][dtype])/float(list_results[0][dtype])*100
    else:
        percent_num_error=0
        percent_error=0
    summary+=name+"\t"+str(list_results[0][dtype])+"\t\t"+str(list_results[1][dtype])+"\t("+"%.3f" % percent_num_error+"%)\t"+str(list_results[2][dtype]+list_results[3][dtype])+"\t("+"%.3f" % percent_error+"%)\t""\n"
    list_results[0][4]+=list_results[0][dtype]
    list_results[1][4]+=list_results[1][dtype]
    list_results[2][4]+=list_results[2][dtype]
    list_results[3][4]+=list_results[3][dtype]
 
if only_numbers:
    print(str(list_results[1][4])+"\n"+str(list_results[2][4]+list_results[3][4]))
else:
    print(summary)
    if (list_results[0][4] > 0 ):
        percent_num_error=float(list_results[1][4])/float(list_results[0][4])*100
        percent_error=float(list_results[2][4]+list_results[3][4])/float(list_results[0][4])*100
    else:
        percent_num_error=0
        percent_error=0
    if (prec=='x'):
        print("--> ALL PRECISIONS\t"+str(list_results[0][4])+"\t\t"+str(list_results[1][4])+"\t("+"%.3f" % percent_num_error+"%)\t"+str(list_results[2][4]+list_results[3][4])+"\t("+"%.3f" % percent_error+"%)\t""\n")
    if list_results[0][4] == 0:
        print("NO TESTS WERE ANALYZED, please use the -r option to run the LAPACK TESTING")
 
# This may close the sys.stdout stream, so make it the last statement
f.close()